ucar.nc2.thredds

Class DqcStationObsDataset

java.lang.Object

ucar.nc2.dt.TypedDatasetImpl

ucar.nc2.dt.point.PointObsDatasetImpl

ucar.nc2.dt.point.StationObsDatasetImpl

ucar.nc2.thredds.DqcStationObsDataset

All Implemented Interfaces:

PointCollection, PointObsDataset, StationCollection, StationObsDataset, TypedDataset

public class DqcStationObsDataset
extends StationObsDatasetImpl

This implements a StationObsDataset with a DQC.

Author:

John Caron

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	DqcStationObsDataset.DqcObsImpl

Field Summary

Fields inherited from class ucar.nc2.dt.point.StationObsDatasetImpl

stationHelper, stations

Fields inherited from class ucar.nc2.dt.point.PointObsDatasetImpl

formatter, timeUnit

Fields inherited from class ucar.nc2.dt.TypedDatasetImpl

boundingBox, dataVariables, desc, endDate, location, ncfile, parseInfo, startDate, title

Method Summary

Methods

Modifier and Type	Method and Description
static DqcStationObsDataset	factory(InvDataset ds, java.lang.String dqc_location, java.lang.StringBuilder errlog)
static DqcStationObsDataset	factory(java.lang.String desc, java.lang.String dqc_location, java.lang.StringBuilder errlog)
java.util.List	getData(CancelTask cancel) Get all data, allow user to cancel.
java.util.List	getData(Station s, CancelTask cancel) Get all data for this Station, allow user to cancel.
int	getDataCount() Get estimate of number of data records (may not be exact).
DataIterator	getDataIterator(int bufferSize) Get an efficient iterator over all the data in the Collection.
java.lang.String	getDescription()
java.lang.String	getLocation()
java.lang.String	getTitle()
static void	main(java.lang.String[] args)
protected void	setBoundingBox()
protected void	setEndDate()
protected void	setStartDate()
protected void	setTimeUnits()

Methods inherited from class ucar.nc2.dt.point.StationObsDatasetImpl

getData, getData, getData, getData, getData, getData, getData, getData, getData, getDataClass, getDataIterator, getDataIterator, getDetailInfo, getScientificDataType, getStation, getStationDataCount, getStations, getStations, getStations, getStations, sortByTime

Methods inherited from class ucar.nc2.dt.point.PointObsDatasetImpl

getData, getData, getData, getMetersConversionFactor, getTime, getTimeUnits

Methods inherited from class ucar.nc2.dt.TypedDatasetImpl

close, findGlobalAttributeIgnoreCase, getBoundingBox, getDataVariable, getDataVariables, getEndDate, getGlobalAttributes, getLocationURI, getNetcdfFile, getStartDate, removeDataVariable, setDescription, setLocationURI, setTitle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ucar.nc2.dt.TypedDataset

close, findGlobalAttributeIgnoreCase, getBoundingBox, getDataVariable, getDataVariables, getEndDate, getGlobalAttributes, getLocationURI, getNetcdfFile, getStartDate

Methods inherited from interface ucar.nc2.dt.PointCollection

getData, getData, getData, getTimeUnits

Method Detail

factory

public static DqcStationObsDataset factory(InvDataset ds,
                           java.lang.String dqc_location,
                           java.lang.StringBuilder errlog)
                                    throws java.io.IOException

Throws:

java.io.IOException

factory

public static DqcStationObsDataset factory(java.lang.String desc,
                           java.lang.String dqc_location,
                           java.lang.StringBuilder errlog)
                                    throws java.io.IOException

Throws:

java.io.IOException

setTimeUnits

protected void setTimeUnits()

Specified by:

setTimeUnits in class PointObsDatasetImpl

setStartDate

protected void setStartDate()

Specified by:

setStartDate in class TypedDatasetImpl

setEndDate

protected void setEndDate()

Specified by:

setEndDate in class TypedDatasetImpl

setBoundingBox

protected void setBoundingBox()

Specified by:

setBoundingBox in class TypedDatasetImpl

getTitle

public java.lang.String getTitle()

Specified by:

getTitle in interface TypedDataset

Overrides:

getTitle in class TypedDatasetImpl

Returns:

Title of the dataset.

getLocation

public java.lang.String getLocation()

Overrides:

getLocation in class TypedDatasetImpl

getDescription

public java.lang.String getDescription()

Specified by:

getDescription in interface TypedDataset

Overrides:

getDescription in class TypedDatasetImpl

Returns:

Text information about this dataset.

getData

public java.util.List getData(Station s,
                     CancelTask cancel)
                       throws java.io.IOException

Description copied from interface: StationCollection

Get all data for this Station, allow user to cancel.

Parameters:

s - for this Station

cancel - allow user to cancel. Implementors should return ASAP.

Returns:

List of getDataClass()

Throws:

java.io.IOException - on io error

getData

public java.util.List getData(CancelTask cancel)
                       throws java.io.IOException

Description copied from interface: PointCollection

Get all data, allow user to cancel. Return null if too expensive to implement. Call getDataCount() to get estimate of size. This will return a list of getDataClass(), but the actual data may or may not already be read in to memory. In any case, you call dataType.getData() to get the data.

Parameters:

cancel - allow user to cancel. Implementors should return ASAP.

Returns:

List of type getDataClass()

Throws:

java.io.IOException - on io error

See Also:

as a (possibly) more efficient alternative

getDataCount

public int getDataCount()

Description copied from interface: PointCollection

Get estimate of number of data records (may not be exact). Return -1 if not able to estimate.

Returns:

number of data records or -1

getDataIterator

public DataIterator getDataIterator(int bufferSize)
                             throws java.io.IOException

Description copied from interface: PointCollection

Get an efficient iterator over all the data in the Collection. You must fully process the data, or copy it out of the StructureData, as you iterate over it. DO NOT KEEP ANY REFERENCES to the dataType object or the StructureData object.

This is the efficient way to get all the data, it can be 100 times faster than getData(). This will return an iterator over type getDataClass(), and the actual data has already been read into memory, that is, dataType.getData() will not incur any I/O. This is accomplished by buffering bufferSize amount of data at once.

We dont need a cancelTask, just stop the iteration if the user want to cancel.

Example for point observations:
 

 Iterator iter = pointObsDataset.getDataIterator();
 while (iter.hasNext()) {
   PointObsDatatype pobs = (PointObsDatatype) iter.next();
   StructureData sdata = pobs.getData();
   // process fully
 }
 

Parameters:

bufferSize - if > 0, the internal buffer size, else use the default. Typically 100k - 1M for best results.

Returns:

iterator over type getDataClass(), no guarenteed order.

Throws:

java.io.IOException - on io error

main

public static void main(java.lang.String[] args)
                 throws java.io.IOException

Throws:

java.io.IOException