This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by gtool5 configure 1.0.0, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --with-netcdf=/usr/lib/libnetcdf.so --with-netcdff=/usr/lib/libnetcdff.so --with-netcdf-include=/usr/include/netcdf.mod ## --------- ## ## Platform. ## ## --------- ## hostname = dennou-k uname -m = x86_64 uname -r = 3.16.0-4-amd64 uname -s = Linux uname -v = #1 SMP Debian 3.16.51-3 (2017-12-13) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/uwabami/bin PATH: /home/uwabami/Library/git/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/local/games PATH: /usr/games ## ----------- ## ## Core tests. ## ## ----------- ## configure:2266: gtool5 1.0.0 configure:2311: checking build system type configure:2325: result: x86_64-unknown-linux-gnu configure:2345: checking host system type configure:2358: result: x86_64-unknown-linux-gnu configure:2397: checking for a BSD-compatible install configure:2465: result: /usr/bin/install -c configure:2476: checking whether build environment is sane configure:2531: result: yes configure:2682: checking for a thread-safe mkdir -p configure:2721: result: /bin/mkdir -p configure:2728: checking for gawk configure:2744: found /usr/bin/gawk configure:2755: result: gawk configure:2766: checking whether make sets $(MAKE) configure:2788: result: yes configure:2817: checking whether make supports nested variables configure:2834: result: yes configure:2923: checking whether UID '1068' is supported by ustar format configure:2926: result: yes configure:2933: checking whether GID '1068' is supported by ustar format configure:2936: result: yes configure:2944: checking how to create a ustar tar archive configure:2955: tar --version tar (GNU tar) 1.27.1 Copyright (C) 2013 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:2958: $? = 0 configure:2998: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:3001: $? = 0 configure:3005: tar -xf - &5 GNU Fortran (Debian 4.9.2-10+deb8u2) 4.9.2 Copyright (C) 2014 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:3264: $? = 0 configure:3253: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.9/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 4.9.2-10+deb8u2' --with-bugurl=file:///usr/share/doc/gcc-4.9/README.Bugs --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.9 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.9 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.9-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.9-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.9-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --with-arch-32=i586 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.9.2 (Debian 4.9.2-10+deb8u2) configure:3264: $? = 0 configure:3253: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:3264: $? = 4 configure:3253: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:3264: $? = 4 configure:3279: checking whether the Fortran compiler works configure:3301: gfortran conftest.f >&5 configure:3305: $? = 0 configure:3353: result: yes configure:3356: checking for Fortran compiler default output file name configure:3358: result: a.out configure:3364: checking for suffix of executables configure:3371: gfortran -o conftest conftest.f >&5 configure:3375: $? = 0 configure:3397: result: configure:3413: checking whether we are cross compiling configure:3421: gfortran -o conftest conftest.f >&5 configure:3425: $? = 0 configure:3432: ./conftest configure:3436: $? = 0 configure:3451: result: no configure:3456: checking for suffix of object files configure:3472: gfortran -c conftest.f >&5 configure:3476: $? = 0 configure:3497: result: o configure:3505: checking whether we are using the GNU Fortran compiler configure:3518: gfortran -c conftest.F >&5 configure:3518: $? = 0 configure:3527: result: yes configure:3533: checking whether gfortran accepts -g configure:3544: gfortran -c -g conftest.f >&5 configure:3544: $? = 0 configure:3552: result: yes configure:3589: checking for Fortran flag to compile .f90 files configure:3609: gfortran -c -g -O2 conftest.f90 >&5 configure:3609: $? = 0 configure:3618: result: none configure:3647: checking gfortran can handle fortran >= 90 program. configure:3666: gfortran -c -g -O2 conftest.f90 >&5 configure:3666: $? = 0 configure:3684: result: yes configure:3692: checking gfortran module type configure:3749: result: std.mod configure:3777: checking gfortran module path include flag configure:3805: gfortran -c -g -O2 conftest.f90 >&5 configure:3805: $? = 0 configure:3822: gfortran -c -g -O2 -Itmpdir_0 conftest.f90 >&5 configure:3822: $? = 0 configure:3841: result: -I configure:3853: checking gfortran can handle fortran >= 2003 feature. configure:3873: gfortran -c -g -O2 conftest.f90 >&5 configure:3873: $? = 0 configure:3888: result: yes configure:3908: checking extra libraries: MPI... configure:3927: checking MPI compiler configure:3938: result: no configure:3962: checking compile with MPI library default=no configure:3973: result: no configure:4026: gtool5 library is configued without MPI sources. configure:4199: checking for doxygen configure:4229: result: no configure:4238: Doxygen not found - continuing without Doxygen support configure:4253: checking for dot configure:4269: found /usr/bin/dot configure:4280: result: dot configure:4301: checking nf-config or libnetcdf and libnetcdff... configure:4319: checking --with-nf-config configure:4330: result: no configure:4341: checking --with-netcdf configure:4348: result: /usr/lib/libnetcdf.so configure:4374: checking --with-netcdff configure:4381: result: /usr/lib/libnetcdff.so configure:4407: checking --with-netcdf-include configure:4414: result: /usr/include/netcdf.mod configure:4446: use /usr/lib/libnetcdf.so and /usr/lib/libnetcdff.so configure:4504: checking try compile netcdf test configure:4519: gfortran -o conftest -I/usr/include -g -O2 conftest.f90 -L/usr/lib -lnetcdff -L/usr/lib -lnetcdf >&5 configure:4519: $? = 0 configure:4537: result: ok configure:4558: checking --with-ncdump configure:4569: result: no configure:4579: search ncdump ... configure:4583: checking for ncdump configure:4601: found /usr/bin/ncdump configure:4614: result: /usr/bin/ncdump configure:4641: checking whether to enable Valgrind on the unit tests configure:4654: checking for valgrind configure:4684: result: no configure:4709: result: yes configure:4913: checking for style of include used by make configure:4941: result: GNU configure:5012: checking for gcc configure:5028: found /usr/bin/gcc configure:5039: result: gcc configure:5268: checking for C compiler version configure:5277: gcc --version >&5 gcc (Debian 4.9.2-10+deb8u2) 4.9.2 Copyright (C) 2014 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5288: $? = 0 configure:5277: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.9/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 4.9.2-10+deb8u2' --with-bugurl=file:///usr/share/doc/gcc-4.9/README.Bugs --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.9 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.9 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.9-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.9-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.9-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --with-arch-32=i586 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.9.2 (Debian 4.9.2-10+deb8u2) configure:5288: $? = 0 configure:5277: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:5288: $? = 4 configure:5277: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:5288: $? = 4 configure:5292: checking whether we are using the GNU C compiler configure:5311: gcc -c -DF03_FEATURE conftest.c >&5 configure:5311: $? = 0 configure:5320: result: yes configure:5329: checking whether gcc accepts -g configure:5349: gcc -c -g -DF03_FEATURE conftest.c >&5 configure:5349: $? = 0 configure:5390: result: yes configure:5407: checking for gcc option to accept ISO C89 configure:5470: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:5470: $? = 0 configure:5483: result: none needed configure:5508: checking whether gcc understands -c and -o together configure:5530: gcc -c conftest.c -o conftest2.o configure:5533: $? = 0 configure:5530: gcc -c conftest.c -o conftest2.o configure:5533: $? = 0 configure:5545: result: yes configure:5564: checking dependency style of gcc configure:5675: result: none configure:5740: checking for ar configure:5756: found /usr/bin/ar configure:5767: result: ar configure:5793: checking the archiver (ar) interface configure:5809: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:5809: $? = 0 configure:5811: ar cru libconftest.a conftest.o >&5 configure:5814: $? = 0 configure:5842: result: ar configure:5910: checking for gcc configure:5937: result: gcc configure:6166: checking for C compiler version configure:6175: gcc --version >&5 gcc (Debian 4.9.2-10+deb8u2) 4.9.2 Copyright (C) 2014 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:6186: $? = 0 configure:6175: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.9/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 4.9.2-10+deb8u2' --with-bugurl=file:///usr/share/doc/gcc-4.9/README.Bugs --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.9 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.9 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --with-system-zlib --disable-browser-plugin --enable-java-awt=gtk --enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.9-amd64/jre --enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.9-amd64 --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.9-amd64 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --enable-objc-gc --enable-multiarch --with-arch-32=i586 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.9.2 (Debian 4.9.2-10+deb8u2) configure:6186: $? = 0 configure:6175: gcc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:6186: $? = 4 configure:6175: gcc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:6186: $? = 4 configure:6190: checking whether we are using the GNU C compiler configure:6218: result: yes configure:6227: checking whether gcc accepts -g configure:6288: result: yes configure:6305: checking for gcc option to accept ISO C89 configure:6381: result: none needed configure:6406: checking whether gcc understands -c and -o together configure:6443: result: yes configure:6462: checking dependency style of gcc configure:6573: result: none configure:6593: checking how to run the C preprocessor configure:6624: gcc -E -DF03_FEATURE conftest.c configure:6624: $? = 0 configure:6638: gcc -E -DF03_FEATURE conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory #include ^ compilation terminated. configure:6638: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gtool5" | #define PACKAGE_TARNAME "gtool5" | #define PACKAGE_VERSION "1.0.0" | #define PACKAGE_STRING "gtool5 1.0.0" | #define PACKAGE_BUGREPORT "dcstaff@gfd-dennou.org" | #define PACKAGE_URL "" | #define PACKAGE "gtool5" | #define VERSION "1.0.0" | /* end confdefs.h. */ | #include configure:6663: result: gcc -E configure:6683: gcc -E -DF03_FEATURE conftest.c configure:6683: $? = 0 configure:6697: gcc -E -DF03_FEATURE conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory #include ^ compilation terminated. configure:6697: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "gtool5" | #define PACKAGE_TARNAME "gtool5" | #define PACKAGE_VERSION "1.0.0" | #define PACKAGE_STRING "gtool5 1.0.0" | #define PACKAGE_BUGREPORT "dcstaff@gfd-dennou.org" | #define PACKAGE_URL "" | #define PACKAGE "gtool5" | #define VERSION "1.0.0" | /* end confdefs.h. */ | #include configure:6771: checking how to print strings configure:6798: result: printf configure:6819: checking for a sed that does not truncate output configure:6883: result: /bin/sed configure:6901: checking for grep that handles long lines and -e configure:6959: result: /bin/grep configure:6964: checking for egrep configure:7026: result: /bin/grep -E configure:7031: checking for fgrep configure:7093: result: /bin/grep -F configure:7128: checking for ld used by gcc configure:7195: result: /usr/bin/ld configure:7202: checking if the linker (/usr/bin/ld) is GNU ld configure:7217: result: yes configure:7229: checking for BSD- or MS-compatible name lister (nm) configure:7278: result: /usr/bin/nm -B configure:7408: checking the name lister (/usr/bin/nm -B) interface configure:7415: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:7418: /usr/bin/nm -B "conftest.o" configure:7421: output 0000000000000000 B some_variable configure:7428: result: BSD nm configure:7431: checking whether ln -s works configure:7435: result: yes configure:7443: checking the maximum length of command line arguments configure:7574: result: 1572864 configure:7591: checking whether the shell understands some XSI constructs configure:7601: result: yes configure:7605: checking whether the shell understands "+=" configure:7611: result: yes configure:7646: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format configure:7686: result: func_convert_file_noop configure:7693: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format configure:7713: result: func_convert_file_noop configure:7720: checking for /usr/bin/ld option to reload object files configure:7727: result: -r configure:7801: checking for objdump configure:7817: found /usr/bin/objdump configure:7828: result: objdump configure:7860: checking how to recognize dependent libraries configure:8058: result: pass_all configure:8143: checking for dlltool configure:8173: result: no configure:8203: checking how to associate runtime and link libraries configure:8230: result: printf %s\n configure:8354: checking for archiver @FILE support configure:8371: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:8371: $? = 0 configure:8374: ar cru libconftest.a @conftest.lst >&5 configure:8377: $? = 0 configure:8382: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:8385: $? = 1 configure:8397: result: @ configure:8455: checking for strip configure:8471: found /usr/bin/strip configure:8482: result: strip configure:8554: checking for ranlib configure:8570: found /usr/bin/ranlib configure:8581: result: ranlib configure:8683: checking command to parse /usr/bin/nm -B output from gcc object configure:8803: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:8806: $? = 0 configure:8810: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8813: $? = 0 configure:8879: gcc -o conftest -g -O2 -DF03_FEATURE conftest.c conftstm.o >&5 configure:8882: $? = 0 configure:8920: result: ok configure:8957: checking for sysroot configure:8987: result: no configure:9064: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:9067: $? = 0 configure:9256: checking for mt configure:9272: found /bin/mt configure:9283: result: mt configure:9306: checking if mt is a manifest tool configure:9312: mt '-?' configure:9320: result: no configure:9958: checking for ANSI C header files configure:9978: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:9978: $? = 0 configure:10051: gcc -o conftest -g -O2 -DF03_FEATURE conftest.c -L/usr/lib -lnetcdff -L/usr/lib -lnetcdf >&5 configure:10051: $? = 0 configure:10051: ./conftest configure:10051: $? = 0 configure:10062: result: yes configure:10075: checking for sys/types.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for sys/stat.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for stdlib.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for string.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for memory.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for strings.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for inttypes.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for stdint.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10075: checking for unistd.h configure:10075: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10075: $? = 0 configure:10075: result: yes configure:10089: checking for dlfcn.h configure:10089: gcc -c -g -O2 -DF03_FEATURE conftest.c >&5 configure:10089: $? = 0 configure:10089: result: yes configure:10275: checking for objdir configure:10290: result: .libs configure:10561: checking if gcc supports -fno-rtti -fno-exceptions configure:10579: gcc -c -g -O2 -DF03_FEATURE -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C configure:10583: $? = 0 configure:10596: result: no configure:10923: checking for gcc option to produce PIC configure:10930: result: -fPIC -DPIC configure:10938: checking if gcc PIC flag -fPIC -DPIC works configure:10956: gcc -c -g -O2 -DF03_FEATURE -fPIC -DPIC -DPIC conftest.c >&5 configure:10960: $? = 0 configure:10973: result: yes configure:11002: checking if gcc static flag -static works configure:11030: result: yes configure:11045: checking if gcc supports -c -o file.o configure:11066: gcc -c -g -O2 -DF03_FEATURE -o out/conftest2.o conftest.c >&5 configure:11070: $? = 0 configure:11092: result: yes configure:11100: checking if gcc supports -c -o file.o configure:11147: result: yes configure:11180: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:12337: result: yes configure:12577: checking dynamic linker characteristics configure:13077: gcc -o conftest -g -O2 -DF03_FEATURE -Wl,-rpath -Wl,/foo conftest.c -L/usr/lib -lnetcdff -L/usr/lib -lnetcdf >&5 configure:13077: $? = 0 configure:13311: result: GNU/Linux ld.so configure:13418: checking how to hardcode library paths into programs configure:13443: result: immediate configure:13983: checking whether stripping libraries is possible configure:13988: result: yes configure:14023: checking if libtool supports shared libraries configure:14025: result: yes configure:14028: checking whether to build shared libraries configure:14049: result: no configure:14052: checking whether to build static libraries configure:14056: result: yes configure:14185: checking if libtool supports shared libraries configure:14187: result: yes configure:14190: checking whether to build shared libraries configure:14210: result: no configure:14213: checking whether to build static libraries configure:14217: result: yes configure:14251: gfortran -c -I/usr/include -g -O2 conftest.f90 >&5 configure:14254: $? = 0 configure:14701: checking for gfortran option to produce PIC configure:14708: result: -fPIC configure:14716: checking if gfortran PIC flag -fPIC works configure:14734: gfortran -c -I/usr/include -g -O2 -fPIC conftest.f90 >&5 configure:14738: $? = 0 configure:14751: result: yes configure:14774: checking if gfortran static flag -static works configure:14802: result: yes configure:14814: checking if gfortran supports -c -o file.o configure:14835: gfortran -c -I/usr/include -g -O2 -o out/conftest2.o conftest.f90 >&5 configure:14839: $? = 0 configure:14861: result: yes configure:14866: checking if gfortran supports -c -o file.o configure:14913: result: yes configure:14943: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:16050: result: yes configure:16191: checking dynamic linker characteristics configure:16853: result: GNU/Linux ld.so configure:16906: checking how to hardcode library paths into programs configure:16931: result: immediate configure:17132: checking that generated files are newer than configure configure:17138: result: done configure:17189: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by gtool5 config.status 1.0.0, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on dennou-k config.status:1220: creating Makefile config.status:1220: creating src/Makefile config.status:1220: creating src/sysdep/Makefile config.status:1220: creating src/dc_utils/Makefile config.status:1220: creating src/gtdata/Makefile config.status:1220: creating src/gtdata/gtdata_memory/Makefile config.status:1220: creating src/gtdata/gtdata_netcdf/Makefile config.status:1220: creating src/gtdata/gtdata_netcdf/gtdata_netcdf_file/Makefile config.status:1220: creating src/gtool/Makefile config.status:1220: creating src/gtool/gtool_history/Makefile config.status:1220: creating src/gtool/gtool_history_nmlinfo/Makefile config.status:1220: creating src/gtool/gtool_historyauto/Makefile config.status:1220: creating test/Makefile config.status:1220: creating test/dc_args_test.sh config.status:1220: creating test/dc_calendar_test.sh config.status:1220: creating test/dc_clock_test.sh config.status:1220: creating test/dc_date_test.sh config.status:1220: creating test/dc_hash_test.sh config.status:1220: creating test/dc_iounit_test.sh config.status:1220: creating test/dc_scaledsec_test.sh config.status:1220: creating test/dc_string_test.sh config.status:1220: creating test/dc_test_test.sh config.status:1220: creating test/dc_url_test.sh config.status:1220: creating test/histauto.sh config.status:1220: creating test/histauto2.sh config.status:1220: creating test/histauto2_mpi.sh config.status:1220: creating test/histauto_mpi.sh config.status:1220: creating test/histaxis.sh config.status:1220: creating test/histcopy.sh config.status:1220: creating test/histget.sh config.status:1220: creating test/histget_mpi.sh config.status:1220: creating test/histgetattr.sh config.status:1220: creating test/histgetattr_mpi.sh config.status:1220: creating test/histgt4bc.sh config.status:1220: creating test/histinquire.sh config.status:1220: creating test/histnmlinfo.sh config.status:1220: creating test/histtest.sh config.status:1220: creating test/histtest_mpi.sh config.status:1220: creating bin/Makefile config.status:1220: creating doc/Makefile config.status:1220: creating doc/doxyfile config.status:1392: executing depfiles commands config.status:1392: executing libtool commands ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_MPI=no ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_dcf2003_check=yes ac_cv_dcf90_check=yes ac_cv_dcf90_modext=.mod ac_cv_dcf90_modflag=-I ac_cv_dcf90_modtype=std.mod ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=gfortran ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_srcext_f90=none ac_cv_header_dlfcn_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_mpifc=no ac_cv_ncdump=/usr/bin/ncdump ac_cv_netcdf_check=yes ac_cv_netcdf_include=/usr/include/netcdf.mod ac_cv_netcdf_library=/usr/lib/libnetcdf.so ac_cv_netcdff_library=/usr/lib/libnetcdff.so ac_cv_nf_config=no ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_SED=/bin/sed ac_cv_path_ac_cv_ncdump=/usr/bin/ncdump ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='gcc -E' ac_cv_prog_DOT=dot ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_make_make_set=yes ac_cv_try_mpi=no am_cv_CC_dependencies_compiler_type=none am_cv_ar_interface=ar am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes am_cv_prog_tar_ustar=gnutar lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_compiler_static_works_FC=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop ## ----------------- ## ## Output variables. ## ## ----------------- ## $(MAKE) $(AM_MAKEFLAGS) -k check-valgrind-tool VALGRIND_TOOL=$(tool); \ $(if $(VALGRIND_HAVE_TOOL_$(tool))$(VALGRIND_HAVE_TOOL_exp_$(tool)), \ ) \ LOG_COMPILER="$(VALGRIND_LOG_COMPILER)" \ LOG_FLAGS="$(valgrind_$(VALGRIND_TOOL)_flags)" \ TESTS_ENVIRONMENT="$(VALGRIND_TESTS_ENVIRONMENT)" \ TEST_SUITE_LOG=test-suite-$(VALGRIND_TOOL).log $(MAKE) check-TESTS \ $(TESTS_ENVIRONMENT) \ $(VALGRIND) $(VALGRIND_SUPPRESSIONS) --error-exitcode=1 $(VALGRIND_FLAGS) $(valgrind_lt) \ ) -$(foreach tool,$(valgrind_tools), \ @echo "Need to reconfigure with --enable-valgrind" @echo "Need to reconfigure with --enable-valgrind" G_DEBUG=fatal-warnings,fatal-criticals,gc-friendly G_SLICE=always-malloc,debug-blocks \ env VALGRIND=$(VALGRIND) \ # # (Default: --num-callers=30) # files to load. (Default: empty) # memcheck, helgrind, drd, sgcheck). (Default: various) # - VALGRIND_$toolname_FLAGS: Flags to pass to Valgrind $toolname (one of: # - VALGRIND_FLAGS: General flags to pass to all Valgrind tools. # - VALGRIND_SUPPRESSIONS_FILES: Space-separated list of Valgrind suppressions # Internal use # Optional variables # Optional: # Support running with and without libtool. # Use recursive makes in order to ignore errors during check # Valgrind check # Valgrind running ' .PHONY: check-valgrind check-valgrind-tool ACLOCAL='${SHELL} /GFD_Dennou_Club/dc-arch/gtool/arch/gtool5_trunk/build-aux/missing aclocal-1.14' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /GFD_Dennou_Club/dc-arch/gtool/arch/gtool5_trunk/build-aux/missing autoconf' AUTOHEADER='${SHELL} /GFD_Dennou_Club/dc-arch/gtool/arch/gtool5_trunk/build-aux/missing autoheader' AUTOMAKE='${SHELL} /GFD_Dennou_Club/dc-arch/gtool/arch/gtool5_trunk/build-aux/missing automake-1.14' AWK='gawk' CC='gcc' CCDEPMODE='depmode=none' CFLAGS='-g -O2' CPP='gcc -E' CPPFLAGS=' -DF03_FEATURE' CYGPATH_W='echo' DEFS='-DPACKAGE_NAME=\"gtool5\" -DPACKAGE_TARNAME=\"gtool5\" -DPACKAGE_VERSION=\"1.0.0\" -DPACKAGE_STRING=\"gtool5\ 1.0.0\" -DPACKAGE_BUGREPORT=\"dcstaff@gfd-dennou.org\" -DPACKAGE_URL=\"\" -DPACKAGE=\"gtool5\" -DVERSION=\"1.0.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\"' DEPDIR='.deps' DISTCHECK_CONFIGURE_FLAGS += --disable-valgrind DISTCHECK_CONFIGURE_FLAGS ?= DLLTOOL='false' DOT='dot' DOXYGEN='' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' F03ENABLE='yes' F90MODTYPE='std.mod' FC='gfortran' FCFLAGS='-I/usr/include -g -O2' FCFLAGS_f90='' FGREP='/bin/grep -F' GREP='/bin/grep' HAVE_DOXYGEN_FALSE='' HAVE_DOXYGEN_TRUE='#' HAVE_F03_FALSE='#' HAVE_F03_TRUE='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='' LIBOBJS='' LIBS='-L/usr/lib -lnetcdff -L/usr/lib -lnetcdf' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIBTOOL_DEPS='build-aux/ltmain.sh' LIPO='' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} /GFD_Dennou_Club/dc-arch/gtool/arch/gtool5_trunk/build-aux/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='/bin/mkdir -p' MODEXT='.mod' MODPATHFLAG='-I' MOSTLYCLEANFILES += $(valgrind_log_files) MOSTLYCLEANFILES ?= MPIEXEC='' MPIEXECOPTS='' MPIEXECPROCNUM='' MPIFC='' NCDUMP='/usr/bin/ncdump' NM='/usr/bin/nm -B' NMEDIT='' NO_MPIFC_FALSE='#' NO_MPIFC_TRUE='' NO_MPI_TEST_FALSE='#' NO_MPI_TEST_TRUE='' NO_NCDUMP_FALSE='' NO_NCDUMP_TRUE='#' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='gtool5' PACKAGE_BUGREPORT='dcstaff@gfd-dennou.org' PACKAGE_NAME='gtool5' PACKAGE_STRING='gtool5 1.0.0' PACKAGE_TARNAME='gtool5' PACKAGE_URL='' PACKAGE_VERSION='1.0.0' PATH_SEPARATOR=':' RANLIB='ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/bash' STRIP='strip' VALGRIND='' VALGRIND_CHECK_RULES=' VALGRIND_ENABLED='yes' VALGRIND_ENABLED_FALSE='#' VALGRIND_ENABLED_TRUE='' VALGRIND_FLAGS ?= --num-callers=30 VALGRIND_HAVE_TOOL_drd='' VALGRIND_HAVE_TOOL_exp_sgcheck='' VALGRIND_HAVE_TOOL_helgrind='' VALGRIND_HAVE_TOOL_memcheck='' VALGRIND_LOG_COMPILER = \ VALGRIND_SUPPRESSIONS ?= $(addprefix --suppressions=,$(VALGRIND_SUPPRESSIONS_FILES)) VALGRIND_TESTS_ENVIRONMENT = \ VALGRIND_drd_FLAGS ?= VALGRIND_helgrind_FLAGS ?= --history-level=approx VALGRIND_memcheck_FLAGS ?= --leak-check=full --show-reachable=no VALGRIND_sgcheck_FLAGS ?= VERSION='1.0.0' ac_ct_AR='ar' ac_ct_CC='gcc' ac_ct_DUMPBIN='' ac_ct_FC='' ac_cv_mpiexec='' ac_cv_ncdump='/usr/bin/ncdump' ac_cv_nf_config='no' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='tar --format=ustar -chf - "$$tardir"' am__untar='tar -xf -' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' check-valgrind-tool: check-valgrind: datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' else else else endif endif endif exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' ifeq ($(VALGRIND_ENABLED),yes) ifeq ($(VALGRIND_ENABLED),yes) ifneq ($(LIBTOOL),) includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /GFD_Dennou_Club/dc-arch/gtool/arch/gtool5_trunk/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr/local/gtool' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' valgrind_drd_flags = --tool=drd $(VALGRIND_drd_FLAGS) valgrind_helgrind_flags = --tool=helgrind $(VALGRIND_helgrind_FLAGS) valgrind_log_files = $(addprefix test-suite-,$(addsuffix .log,$(valgrind_tools))) valgrind_lt = valgrind_lt = $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=execute valgrind_memcheck_flags = --tool=memcheck $(VALGRIND_memcheck_FLAGS) valgrind_quiet = $(valgrind_quiet_$(V)) valgrind_quiet_ = $(valgrind_quiet_$(AM_DEFAULT_VERBOSITY)) valgrind_quiet_0 = --quiet valgrind_sgcheck_flags = --tool=exp-sgcheck $(VALGRIND_sgcheck_FLAGS) valgrind_tools = memcheck helgrind drd sgcheck ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "gtool5" #define PACKAGE_TARNAME "gtool5" #define PACKAGE_VERSION "1.0.0" #define PACKAGE_STRING "gtool5 1.0.0" #define PACKAGE_BUGREPORT "dcstaff@gfd-dennou.org" #define PACKAGE_URL "" #define PACKAGE "gtool5" #define VERSION "1.0.0" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" configure: exit 0